Difference between revisions of "TSS:Hg 10478.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RBM15C= | |RBM15C= | ||
|SHARP= | |SHARP= | ||
| − | |all_trans=AK094772:0 | + | |all_trans=AK094772:0 LF206701:3 MA442278:3 LF357212:47 MA592789:47 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-11849 |
|end=15835864 | |end=15835864 | ||
|end_of_center_position=15835859 | |end_of_center_position=15835859 | ||
|entrez_id=23013 | |entrez_id=23013 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=HIAA0929 | + | |gene_alias=HIAA0929{{!}}MINT{{!}}RBM15C{{!}}SHARP |
|gene_description=spen family transcriptional repressor | |gene_description=spen family transcriptional repressor | ||
|gene_id=729614 | |gene_id=729614 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_015001 | |nearest_refseq=NM_015001 | ||
|nearest_unigene=Hs.744843 | |nearest_unigene=Hs.744843 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=15835852 | |start=15835852 | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15835858 |
|---|---|
| End of the center position in the TSS region: | 15835859 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK094772 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | AK094772:0 LF206701:3 MA442278:3 LF357212:47 MA592789:47 |
TATA-Box annotation
| Distance to TSS: | -11849 |
|---|---|
| Nearest PromoterID: | NM_015001 |
| Entrez ID: | 23013 |
| Nearest Unigene: | Hs.744843 |
| Nearest Refseq: | NM_015001 |
| Nearest Ensembl: | ENSG00000065526 |
| Gene Name: | uncharacterized LOC729614 |
| Gene Alias: | HIAA0929|MINT|RBM15C|SHARP |
| Gene Description: | spen family transcriptional repressor |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
