Difference between revisions of "TSS:Hg 104798.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|PTC3= | |PTC3= | ||
|RFG= | |RFG= | ||
| − | |all_trans=DQ600529:8 U38436:-17 | + | |all_trans=LF349878:0 MA585455:0 DQ600529:8 U38436:-17 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=15950 | |distance_to_tss=15950 | ||
|end=46003598 | |end=46003598 | ||
| + | |end_of_center_position=46003587 | ||
|entrez_id=8031 | |entrez_id=8031 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=ARA70 | + | |gene_alias=ARA70{{!}}ELE1{{!}}PTC3{{!}}RFG |
|gene_description=nuclear receptor coactivator 4 | |gene_description=nuclear receptor coactivator 4 | ||
|gene_name=NCOA4 | |gene_name=NCOA4 | ||
| Line 19: | Line 20: | ||
|nearest_refseq=NM_005437 | |nearest_refseq=NM_005437 | ||
|nearest_unigene=Hs.643658 | |nearest_unigene=Hs.643658 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=46003575 | |start=46003575 | ||
| + | |start_of_center_position=46003586 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF349878 MA585455 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104798.1 | |tss_id=hg_104798.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:59, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 46003586 |
|---|---|
| End of the center position in the TSS region: | 46003587 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF349878 MA585455 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | LF349878:0 MA585455:0 DQ600529:8 U38436:-17 |
TATA-Box annotation
| Distance to TSS: | 15950 |
|---|---|
| Nearest PromoterID: | NM_001145262 |
| Entrez ID: | 8031 |
| Nearest Unigene: | Hs.643658 |
| Nearest Refseq: | NM_005437 |
| Nearest Ensembl: | ENSG00000266412 |
| Gene Name: | NCOA4 |
| Gene Alias: | ARA70|ELE1|PTC3|RFG |
| Gene Description: | nuclear receptor coactivator 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
