Difference between revisions of "TSS:Hg 104807.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ANXA8L2= | |ANXA8L2= | ||
|VAC-beta= | |VAC-beta= | ||
| − | |all_trans=ENST00000622769.4 | + | |all_trans=ENST00000622769.4:0 BC008813:0 AK313626:23 ENST00000584982.7:-43 ENST00000613703.4:-43 X16662:43 ENST00000616785.1:48 BC021910:48 ENST00000611655.1:52 AK300191:52 ENST00000620353.1:72 ENST00000619162.5:72 NM_001098845:72 NM_001278923:72 NM_001278924:72 AK307182:72 AK223149:72 KJ905685:148 CU679125:148 |
|bA145E20.2= | |bA145E20.2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-89 |
|end=46375704 | |end=46375704 | ||
|end_of_center_position=46375687 | |end_of_center_position=46375687 | ||
|entrez_id=728113 | |entrez_id=728113 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=ANXA8 | + | |gene_alias=ANXA8{{!}}ANXA8L2{{!}}VAC-beta{{!}}bA145E20.2 |
| − | |gene_description=annexin A8 | + | |gene_description=annexin A8 like 1 |
|gene_id=728113 | |gene_id=728113 | ||
| − | |gene_name=annexin A8 | + | |gene_name=annexin A8 like 1 |
|gene_source=HGNC:23334 | |gene_source=HGNC:23334 | ||
|gene_symbol=ANXA8L1 | |gene_symbol=ANXA8L1 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:23334 | |hgnc_mgi_id=HGNC:23334 | ||
|nearest_ensembl=ENSG00000264230 | |nearest_ensembl=ENSG00000264230 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278924 |
|nearest_refseq=NM_001630 | |nearest_refseq=NM_001630 | ||
|nearest_unigene=Hs.705389 | |nearest_unigene=Hs.705389 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=46375669 | |start=46375669 | ||
|start_of_center_position=46375686 | |start_of_center_position=46375686 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000622769.4 | + | |transcript_name=ENST00000622769.4 BC008813 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104807.1 | |tss_id=hg_104807.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5VT79 |
}} | }} | ||
Revision as of 17:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46375686 |
|---|---|
| End of the center position in the TSS region: | 46375687 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000622769.4 BC008813 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000622769.4:0 BC008813:0 AK313626:23 ENST00000584982.7:-43 ENST00000613703.4:-43 X16662:43 ENST00000616785.1:48 BC021910:48 ENST00000611655.1:52 AK300191:52 ENST00000620353.1:72 ENST00000619162.5:72 NM_001098845:72 NM_001278923:72 NM_001278924:72 AK307182:72 AK223149:72 KJ905685:148 CU679125:148 |
TATA-Box annotation
| Distance to TSS: | -89 |
|---|---|
| Nearest PromoterID: | NM_001278924 |
| Entrez ID: | 728113 |
| Nearest Unigene: | Hs.705389 |
| Nearest Refseq: | NM_001630 |
| Nearest Ensembl: | ENSG00000264230 |
| Gene Name: | annexin A8 like 1 |
| Gene Alias: | ANXA8|ANXA8L2|VAC-beta|bA145E20.2 |
| Gene Description: | annexin A8 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
