Difference between revisions of "TSS:Hg 104822.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=184393 | |distance_to_tss=184393 | ||
|end=47096118 | |end=47096118 | ||
| + | |end_of_center_position=47096116 | ||
|entrez_id=26095 | |entrez_id=26095 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=CT126 | + | |gene_alias=CT126{{!}}PTPN20A{{!}}PTPN20B{{!}}bA142I17.1{{!}}bA42B19.1 |
| − | |gene_description= | + | |gene_description=protein tyrosine phosphatase non-receptor type 20 |
|gene_name=PTPN20 | |gene_name=PTPN20 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000204179 | |nearest_ensembl=ENSG00000204179 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001320689 |
|nearest_refseq=NM_015605 | |nearest_refseq=NM_015605 | ||
|nearest_unigene=Hs.440733 | |nearest_unigene=Hs.440733 | ||
| Line 22: | Line 23: | ||
|species=human | |species=human | ||
|start=47096112 | |start=47096112 | ||
| + | |start_of_center_position=47096115 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 17:59, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47096115 |
|---|---|
| End of the center position in the TSS region: | 47096116 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 184393 |
|---|---|
| Nearest PromoterID: | NM_001320689 |
| Entrez ID: | 26095 |
| Nearest Unigene: | Hs.440733 |
| Nearest Refseq: | NM_015605 |
| Nearest Ensembl: | ENSG00000204179 |
| Gene Name: | PTPN20 |
| Gene Alias: | CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
