Difference between revisions of "TSS:Hg 104832.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BMP-3b= | |BMP-3b= | ||
|BMP3B= | |BMP3B= | ||
| − | |all_trans=NM_004962:0 BC028237:0 AK310360:106 AK315322:107 | + | |all_trans=ENST00000580279.2:0 NM_004962:0 BC028237:0 AK310360:106 AK315322:107 D49492:125 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=47300261 | |end=47300261 | ||
|end_of_center_position=47300217 | |end_of_center_position=47300217 | ||
|entrez_id=2662 | |entrez_id=2662 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=BIP | + | |gene_alias=BIP{{!}}BMP-3b{{!}}BMP3B |
|gene_description=growth differentiation factor 10 | |gene_description=growth differentiation factor 10 | ||
|gene_id=2662 | |gene_id=2662 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_004962 | |nearest_refseq=NM_004962 | ||
|nearest_unigene=Hs.2171 | |nearest_unigene=Hs.2171 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=47300172 | |start=47300172 | ||
|start_of_center_position=47300216 | |start_of_center_position=47300216 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_004962 BC028237 | + | |transcript_name=ENST00000580279.2 NM_004962 BC028237 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104832.1 | |tss_id=hg_104832.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N6T2 | + | |uniprot_id=P55107 Q8N6T2 |
}} | }} | ||
Revision as of 17:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47300216 |
|---|---|
| End of the center position in the TSS region: | 47300217 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000580279.2 NM_004962 BC028237 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000580279.2:0 NM_004962:0 BC028237:0 AK310360:106 AK315322:107 D49492:125 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_004962 |
| Entrez ID: | 2662 |
| Nearest Unigene: | Hs.2171 |
| Nearest Refseq: | NM_004962 |
| Nearest Ensembl: | ENSG00000266524 |
| Gene Name: | growth differentiation factor 10 |
| Gene Alias: | BIP|BMP-3b|BMP3B |
| Gene Description: | growth differentiation factor 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
