Difference between revisions of "TSS:Hg 104850.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-2154 | |distance_to_tss=-2154 | ||
|end=48607307 | |end=48607307 | ||
| Line 9: | Line 9: | ||
|entrez_id=58504 | |entrez_id=58504 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=RhoGAP2 | + | |gene_alias=RhoGAP2{{!}}RhoGap22 |
|gene_description=Rho GTPase activating protein 22 | |gene_description=Rho GTPase activating protein 22 | ||
|gene_name=ARHGAP22 | |gene_name=ARHGAP22 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000128805 | |nearest_ensembl=ENSG00000128805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347737 |
|nearest_refseq=NM_021226 | |nearest_refseq=NM_021226 | ||
|nearest_unigene=Hs.655672 | |nearest_unigene=Hs.655672 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=48607285 | |start_of_center_position=48607285 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=2(GCTTTTCTGGGG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48607285 |
|---|---|
| End of the center position in the TSS region: | 48607286 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2154 |
|---|---|
| Nearest PromoterID: | NM_001347737 |
| Entrez ID: | 58504 |
| Nearest Unigene: | Hs.655672 |
| Nearest Refseq: | NM_021226 |
| Nearest Ensembl: | ENSG00000128805 |
| Gene Name: | ARHGAP22 |
| Gene Alias: | RhoGAP2|RhoGap22 |
| Gene Description: | Rho GTPase activating protein 22 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 2(GCTTTTCTGGGG,+,0.00) |
