Difference between revisions of "TSS:Hg 104868.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=109154 |entrez_id=474354 |gc_percent=0.517413 |gene_alias=UNQ933|UNQ9338|VKGE9338 |gene_description=leucine rich repeat contain...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |UNQ9338= | ||
| + | |VKGE9338= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=NA | ||
|distance_to_tss=109154 | |distance_to_tss=109154 | ||
| + | |end=48805102 | ||
| + | |end_of_center_position=48805081 | ||
|entrez_id=474354 | |entrez_id=474354 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=UNQ933 | + | |gene_alias=UNQ933{{!}}UNQ9338{{!}}VKGE9338 |
|gene_description=leucine rich repeat containing 18 | |gene_description=leucine rich repeat containing 18 | ||
|gene_name=LRRC18 | |gene_name=LRRC18 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_001006939 | |nearest_refseq=NM_001006939 | ||
|nearest_unigene=Hs.202438 | |nearest_unigene=Hs.202438 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=48805059 | ||
| + | |start_of_center_position=48805080 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104868.1 | |tss_id=hg_104868.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48805080 |
|---|---|
| End of the center position in the TSS region: | 48805081 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 109154 |
|---|---|
| Nearest PromoterID: | NM_001006939 |
| Entrez ID: | 474354 |
| Nearest Unigene: | Hs.202438 |
| Nearest Refseq: | NM_001006939 |
| Nearest Ensembl: | ENSG00000165383 |
| Gene Name: | LRRC18 |
| Gene Alias: | UNQ933|UNQ9338|VKGE9338 |
| Gene Description: | leucine rich repeat containing 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
