Difference between revisions of "TSS:Hg 104889.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=23732 |entrez_id=644168 |gc_percent=0.437811 |gene_alias=DRG11|PRRXL1 |gene_description=dorsal root ganglia homeobox |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRRXL1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=23805 | ||
| + | |end=49372288 | ||
| + | |end_of_center_position=49372284 | ||
|entrez_id=644168 | |entrez_id=644168 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=DRG11 | + | |gene_alias=DRG11{{!}}PRRXL1 |
|gene_description=dorsal root ganglia homeobox | |gene_description=dorsal root ganglia homeobox | ||
|gene_name=DRGX | |gene_name=DRGX | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001080520 | |nearest_refseq=NM_001080520 | ||
|nearest_unigene=Hs.534530 | |nearest_unigene=Hs.534530 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=49372279 | ||
| + | |start_of_center_position=49372283 | ||
| + | |strand=+ | ||
| + | |tata_box=42(GGCCAGAAAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104889.1 | |tss_id=hg_104889.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:01, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49372283 |
|---|---|
| End of the center position in the TSS region: | 49372284 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 23805 |
|---|---|
| Nearest PromoterID: | NM_001276451 |
| Entrez ID: | 644168 |
| Nearest Unigene: | Hs.534530 |
| Nearest Refseq: | NM_001080520 |
| Nearest Ensembl: | ENSG00000165606 |
| Gene Name: | DRGX |
| Gene Alias: | DRG11|PRRXL1 |
| Gene Description: | dorsal root ganglia homeobox |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 42(GGCCAGAAAAGC,-,0.00) |
