Difference between revisions of "TSS:Hg 104940.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=62503 |entrez_id=100506939 |gc_percent=0.39801 |gene_alias=- |gene_description=PRKG1 antisense RNA 1 |gene_name=PRKG1-AS1 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=NA | ||
|distance_to_tss=62503 | |distance_to_tss=62503 | ||
| + | |end=52251628 | ||
| + | |end_of_center_position=52251625 | ||
|entrez_id=100506939 | |entrez_id=100506939 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_038277 | |nearest_refseq=NR_038277 | ||
|nearest_unigene=Hs.584791 | |nearest_unigene=Hs.584791 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=52251621 | ||
| + | |start_of_center_position=52251624 | ||
| + | |strand=+ | ||
| + | |tata_box=53(TTCTTTAAATGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104940.1 | |tss_id=hg_104940.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:02, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 52251624 |
|---|---|
| End of the center position in the TSS region: | 52251625 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 62503 |
|---|---|
| Nearest PromoterID: | NR_038277 |
| Entrez ID: | 100506939 |
| Nearest Unigene: | Hs.584791 |
| Nearest Refseq: | NR_038277 |
| Nearest Ensembl: | |
| Gene Name: | PRKG1-AS1 |
| Gene Alias: | - |
| Gene Description: | PRKG1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 53(TTCTTTAAATGC,-,0.00) |
