Difference between revisions of "TSS:Hg 104960.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=NA | ||
|distance_to_tss=-29089 | |distance_to_tss=-29089 | ||
| + | |end=52499627 | ||
| + | |end_of_center_position=52499622 | ||
|entrez_id=101928687 | |entrez_id=101928687 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=lnc-MBL2-4 | + | |gene_alias=A-ROD{{!}}LINC01468{{!}}lnc-MBL2-4 |
| − | |gene_description= | + | |gene_description=lncRNA activating regulator of DKK1 |
| − | |gene_name= | + | |gene_name=LNCAROD |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000231131 | |nearest_ensembl=ENSG00000231131 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_120641 | |nearest_refseq=NR_120641 | ||
|nearest_unigene=Hs.380362 | |nearest_unigene=Hs.380362 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=52499616 | ||
| + | |start_of_center_position=52499621 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104960.1 | |tss_id=hg_104960.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:02, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 52499621 |
|---|---|
| End of the center position in the TSS region: | 52499622 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -29089 |
|---|---|
| Nearest PromoterID: | NR_120641 |
| Entrez ID: | 101928687 |
| Nearest Unigene: | Hs.380362 |
| Nearest Refseq: | NR_120641 |
| Nearest Ensembl: | ENSG00000231131 |
| Gene Name: | LNCAROD |
| Gene Alias: | A-ROD|LINC01468|lnc-MBL2-4 |
| Gene Description: | lncRNA activating regulator of DKK1 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
