Difference between revisions of "TSS:Hg 104963.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-136825 | |distance_to_tss=-136825 | ||
|end=52607360 | |end=52607360 | ||
| Line 8: | Line 8: | ||
|entrez_id=101928687 | |entrez_id=101928687 | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
| − | |gene_alias=lnc-MBL2-4 | + | |gene_alias=A-ROD{{!}}LINC01468{{!}}lnc-MBL2-4 |
| − | |gene_description= | + | |gene_description=lncRNA activating regulator of DKK1 |
| − | |gene_name= | + | |gene_name=LNCAROD |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000231131 | |nearest_ensembl=ENSG00000231131 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=52607358 | |start_of_center_position=52607358 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-83(GTATATAAAAGA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 52607358 |
|---|---|
| End of the center position in the TSS region: | 52607359 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -136825 |
|---|---|
| Nearest PromoterID: | NR_120641 |
| Entrez ID: | 101928687 |
| Nearest Unigene: | Hs.380362 |
| Nearest Refseq: | NR_120641 |
| Nearest Ensembl: | ENSG00000231131 |
| Gene Name: | LNCAROD |
| Gene Alias: | A-ROD|LINC01468|lnc-MBL2-4 |
| Gene Description: | lncRNA activating regulator of DKK1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -83(GTATATAAAAGA,-,0.00) |
