Difference between revisions of "TSS:Hg 104978.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|SIP30= | |SIP30= | ||
|ZWINT1= | |ZWINT1= | ||
| + | |all_trans=ENST00000655098.1:0 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-206 | |distance_to_tss=-206 | ||
|end=56361504 | |end=56361504 | ||
| + | |end_of_center_position=56361479 | ||
|entrez_id=11130 | |entrez_id=11130 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=HZwint-1 | + | |gene_alias=HZwint-1{{!}}KNTC2AP{{!}}SIP30{{!}}ZWINT1 |
|gene_description=ZW10 interacting kinetochore protein | |gene_description=ZW10 interacting kinetochore protein | ||
|gene_name=ZWINT | |gene_name=ZWINT | ||
| Line 18: | Line 20: | ||
|nearest_refseq=NM_007057 | |nearest_refseq=NM_007057 | ||
|nearest_unigene=Hs.591363 | |nearest_unigene=Hs.591363 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=56361453 | |start=56361453 | ||
| + | |start_of_center_position=56361478 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=5(GACTATAAGTGG,-,0.00),88(GCGTTTTAAGGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000655098.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104978.1 | |tss_id=hg_104978.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 56361478 |
|---|---|
| End of the center position in the TSS region: | 56361479 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000655098.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENST00000655098.1:0 |
TATA-Box annotation
| Distance to TSS: | -206 |
|---|---|
| Nearest PromoterID: | NM_032997 |
| Entrez ID: | 11130 |
| Nearest Unigene: | Hs.591363 |
| Nearest Refseq: | NM_007057 |
| Nearest Ensembl: | ENSG00000122952 |
| Gene Name: | ZWINT |
| Gene Alias: | HZwint-1|KNTC2AP|SIP30|ZWINT1 |
| Gene Description: | ZW10 interacting kinetochore protein |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 5(GACTATAAGTGG,-,0.00),88(GCGTTTTAAGGG,-,0.00) |
