Difference between revisions of "TSS:Hg 104985.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-310 |entrez_id=253430 |gc_percent=0.58209 |gene_alias=- |gene_description=inositol polyphosphate multikinase |gene_name=IPMK |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-350 | ||
| + | |end=58268249 | ||
| + | |end_of_center_position=58268244 | ||
|entrez_id=253430 | |entrez_id=253430 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_152230 | |nearest_refseq=NM_152230 | ||
|nearest_unigene=Hs.30280 | |nearest_unigene=Hs.30280 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=58268238 | ||
| + | |start_of_center_position=58268243 | ||
| + | |strand=+ | ||
| + | |tata_box=73(GGCTCTAAAGGC,-,0.00),74(GCTCTAAAGGCC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104985.1 | |tss_id=hg_104985.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58268243 |
|---|---|
| End of the center position in the TSS region: | 58268244 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -350 |
|---|---|
| Nearest PromoterID: | NM_152230 |
| Entrez ID: | 253430 |
| Nearest Unigene: | Hs.30280 |
| Nearest Refseq: | NM_152230 |
| Nearest Ensembl: | ENSG00000151151 |
| Gene Name: | IPMK |
| Gene Alias: | - |
| Gene Description: | inositol polyphosphate multikinase |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 73(GGCTCTAAAGGC,-,0.00),74(GCTCTAAAGGCC,+,0.00) |
