Difference between revisions of "TSS:Hg 104994.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=7843 |
|end=58342849 | |end=58342849 | ||
| + | |end_of_center_position=58342849 | ||
|entrez_id=7321 | |entrez_id=7321 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=E2(17)KB1 | + | |gene_alias=E2(17)KB1{{!}}SFT{{!}}UBC4/5{{!}}UBCH5{{!}}UBCH5A |
|gene_description=ubiquitin conjugating enzyme E2 D1 | |gene_description=ubiquitin conjugating enzyme E2 D1 | ||
|gene_name=UBE2D1 | |gene_name=UBE2D1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000072401 | |nearest_ensembl=ENSG00000072401 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_003338 |
|nearest_refseq=NM_003338 | |nearest_refseq=NM_003338 | ||
|nearest_unigene=Hs.129683 | |nearest_unigene=Hs.129683 | ||
| Line 22: | Line 23: | ||
|species=human | |species=human | ||
|start=58342848 | |start=58342848 | ||
| + | |start_of_center_position=58342848 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-57(CCTTTTAAATTG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58342848 |
|---|---|
| End of the center position in the TSS region: | 58342849 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 7843 |
|---|---|
| Nearest PromoterID: | NM_003338 |
| Entrez ID: | 7321 |
| Nearest Unigene: | Hs.129683 |
| Nearest Refseq: | NM_003338 |
| Nearest Ensembl: | ENSG00000072401 |
| Gene Name: | UBE2D1 |
| Gene Alias: | E2(17)KB1|SFT|UBC4/5|UBCH5|UBCH5A |
| Gene Description: | ubiquitin conjugating enzyme E2 D1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -57(CCTTTTAAATTG,+,0.00) |
