Difference between revisions of "TSS:Hg 104997.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |MTTF1= | ||
| + | |MTTFA= | ||
| + | |TCF6= | ||
| + | |TCF6L1= | ||
| + | |TCF6L2= | ||
| + | |TCF6L3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=-753 | |distance_to_tss=-753 | ||
| + | |end=58384398 | ||
| + | |end_of_center_position=58384391 | ||
|entrez_id=7019 | |entrez_id=7019 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=MTDPS15 | + | |gene_alias=MTDPS15{{!}}MTTF1{{!}}MTTFA{{!}}TCF6{{!}}TCF6L1{{!}}TCF6L2{{!}}TCF6L3 |
| − | |gene_description= | + | |gene_description=transcription factor A, mitochondrial |
|gene_name=TFAM | |gene_name=TFAM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000108064 | |nearest_ensembl=ENSG00000108064 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001270782 |
|nearest_refseq=NM_003201 | |nearest_refseq=NM_003201 | ||
|nearest_unigene=Hs.594250 | |nearest_unigene=Hs.594250 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=58384382 | ||
| + | |start_of_center_position=58384390 | ||
| + | |strand=+ | ||
| + | |tata_box=28(TGGTATTTAAGG,-,0.00),30(GTATTTAAGGGC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104997.1 | |tss_id=hg_104997.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58384390 |
|---|---|
| End of the center position in the TSS region: | 58384391 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -753 |
|---|---|
| Nearest PromoterID: | NM_001270782 |
| Entrez ID: | 7019 |
| Nearest Unigene: | Hs.594250 |
| Nearest Refseq: | NM_003201 |
| Nearest Ensembl: | ENSG00000108064 |
| Gene Name: | TFAM |
| Gene Alias: | MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 |
| Gene Description: | transcription factor A, mitochondrial |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 28(TGGTATTTAAGG,-,0.00),30(GTATTTAAGGGC,+,0.00) |
