Difference between revisions of "TSS:Hg 105016.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_108046:0 ENST00000432535.1:104 | + | |all_trans=ENST00000657547.1:0 ENST00000666624.1:0 ENST00000661888.1:0 NR_108046:0 ENST00000660389.1:-24 ENST00000667734.1:66 ENST00000661129.1:102 ENST00000432535.1:104 ENST00000654311.1:104 ENST00000660129.1:104 ENST00000657805.1:105 ENST00000653466.1:105 ENST00000669076.1:105 ENST00000661278.1:107 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_108046 | |nearest_refseq=NR_108046 | ||
|nearest_unigene=Hs.170953 | |nearest_unigene=Hs.170953 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=58999505 | |start=58999505 | ||
|start_of_center_position=58999513 | |start_of_center_position=58999513 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_108046 | + | |transcript_name=ENST00000657547.1 ENST00000666624.1 ENST00000661888.1 NR_108046 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105016.1 | |tss_id=hg_105016.1 | ||
Revision as of 18:04, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58999513 |
|---|---|
| End of the center position in the TSS region: | 58999514 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000657547.1 ENST00000666624.1 ENST00000661888.1 NR_108046 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000657547.1:0 ENST00000666624.1:0 ENST00000661888.1:0 NR_108046:0 ENST00000660389.1:-24 ENST00000667734.1:66 ENST00000661129.1:102 ENST00000432535.1:104 ENST00000654311.1:104 ENST00000660129.1:104 ENST00000657805.1:105 ENST00000653466.1:105 ENST00000669076.1:105 ENST00000661278.1:107 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NR_108046 |
| Entrez ID: | 100507008 |
| Nearest Unigene: | Hs.170953 |
| Nearest Refseq: | NR_108046 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 844 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 844 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
