Difference between revisions of "TSS:Hg 105018.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000432535.1:14 | + | |all_trans=ENST00000667734.1:-9 ENST00000661129.1:12 ENST00000432535.1:14 ENST00000654311.1:14 ENST00000660129.1:14 ENST00000657805.1:15 ENST00000653466.1:15 ENST00000669076.1:15 ENST00000661278.1:17 NR_108046:-79 ENST00000666624.1:-82 ENST00000661888.1:-82 ENST00000657547.1:-84 ENST00000660389.1:-115 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-9 |
|distance_to_tss=86 | |distance_to_tss=86 | ||
|end=58999612 | |end=58999612 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 844 | |gene_description=long intergenic non-protein coding RNA 844 | ||
| − | |gene_id= | + | |gene_id= |
|gene_name=long intergenic non-protein coding RNA 844 | |gene_name=long intergenic non-protein coding RNA 844 | ||
|gene_source=HGNC:45031 | |gene_source=HGNC:45031 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_108046 | |nearest_refseq=NR_108046 | ||
|nearest_unigene=Hs.170953 | |nearest_unigene=Hs.170953 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=58999596 | |start=58999596 | ||
|start_of_center_position=58999604 | |start_of_center_position=58999604 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000667734.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105018.1 | |tss_id=hg_105018.1 | ||
Revision as of 18:04, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58999604 |
|---|---|
| End of the center position in the TSS region: | 58999605 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000667734.1 |
|---|---|
| Distance: | -9 |
| Num_trans: | 14 |
| All_trans: | ENST00000667734.1:-9 ENST00000661129.1:12 ENST00000432535.1:14 ENST00000654311.1:14 ENST00000660129.1:14 ENST00000657805.1:15 ENST00000653466.1:15 ENST00000669076.1:15 ENST00000661278.1:17 NR_108046:-79 ENST00000666624.1:-82 ENST00000661888.1:-82 ENST00000657547.1:-84 ENST00000660389.1:-115 |
TATA-Box annotation
| Distance to TSS: | 86 |
|---|---|
| Nearest PromoterID: | NR_108046 |
| Entrez ID: | 100507008 |
| Nearest Unigene: | Hs.170953 |
| Nearest Refseq: | NR_108046 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 844 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 844 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
