Difference between revisions of "TSS:Hg 105020.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=2867 |entrez_id=105682749 |gc_percent=0.427861 |gene_alias=CCHE1|lncRNA-CCHE1 |gene_description=cervical carcinoma expressed PCNA r...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=2867 | |distance_to_tss=2867 | ||
| + | |end=59173603 | ||
| + | |end_of_center_position=59173598 | ||
|entrez_id=105682749 | |entrez_id=105682749 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=CCHE1 | + | |gene_alias=CCHE1{{!}}lncRNA-CCHE1 |
|gene_description=cervical carcinoma expressed PCNA regulatory lncRNA | |gene_description=cervical carcinoma expressed PCNA regulatory lncRNA | ||
|gene_name=CCEPR | |gene_name=CCEPR | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |lncRNA-CCHE1= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_131782 | |nearest_promoter_id=NR_131782 | ||
|nearest_refseq=NR_131782 | |nearest_refseq=NR_131782 | ||
|nearest_unigene=Hs.592518 | |nearest_unigene=Hs.592518 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=59173591 | ||
| + | |start_of_center_position=59173597 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105020.1 | |tss_id=hg_105020.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59173597 |
|---|---|
| End of the center position in the TSS region: | 59173598 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2867 |
|---|---|
| Nearest PromoterID: | NR_131782 |
| Entrez ID: | 105682749 |
| Nearest Unigene: | Hs.592518 |
| Nearest Refseq: | NR_131782 |
| Nearest Ensembl: | |
| Gene Name: | CCEPR |
| Gene Alias: | CCHE1|lncRNA-CCHE1 |
| Gene Description: | cervical carcinoma expressed PCNA regulatory lncRNA |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
