Difference between revisions of "TSS:Hg 105021.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000373880. | + | |all_trans=AL834339:-1 ENST00000373880.9:45 NM_032439:45 CR749429:53 ENST00000486074.2:63 BC011268:151 AK054956:186 AB384640:256 AM392743:256 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=-1 |
| − | |distance_to_tss= | + | |distance_to_tss=-50 |
|end=59176598 | |end=59176598 | ||
|end_of_center_position=59176593 | |end_of_center_position=59176593 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032439 | |nearest_refseq=NM_032439 | ||
|nearest_unigene=Hs.499704 | |nearest_unigene=Hs.499704 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=59176587 | |start=59176587 | ||
|start_of_center_position=59176592 | |start_of_center_position=59176592 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AL834339 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105021.1 | |tss_id=hg_105021.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:04, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 59176592 |
|---|---|
| End of the center position in the TSS region: | 59176593 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AL834339 |
|---|---|
| Distance: | -1 |
| Num_trans: | 9 |
| All_trans: | AL834339:-1 ENST00000373880.9:45 NM_032439:45 CR749429:53 ENST00000486074.2:63 BC011268:151 AK054956:186 AB384640:256 AM392743:256 |
TATA-Box annotation
| Distance to TSS: | -50 |
|---|---|
| Nearest PromoterID: | NM_032439 |
| Entrez ID: | 84457 |
| Nearest Unigene: | Hs.499704 |
| Nearest Refseq: | NM_032439 |
| Nearest Ensembl: | ENSG00000165443 |
| Gene Name: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Alias: | - |
| Gene Description: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
