Difference between revisions of "TSS:Hg 105033.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-69524 |entrez_id=220965 |gc_percent=0.373134 |gene_alias=FAM13C1 |gene_description=family with sequence similarity 13 member C |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=-69524 | |distance_to_tss=-69524 | ||
| + | |end=59432706 | ||
| + | |end_of_center_position=59432706 | ||
|entrez_id=220965 | |entrez_id=220965 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148541 | |nearest_ensembl=ENSG00000148541 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347840 |
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=59432704 | ||
| + | |start_of_center_position=59432705 | ||
| + | |strand=+ | ||
| + | |tata_box=16(CTCTTTATAAGT,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105033.1 | |tss_id=hg_105033.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:04, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 59432705 |
|---|---|
| End of the center position in the TSS region: | 59432706 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -69524 |
|---|---|
| Nearest PromoterID: | NM_001347840 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | FAM13C |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 16(CTCTTTATAAGT,-,0.00) |
