Difference between revisions of "TSS:Hg 105033.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-69524 | |distance_to_tss=-69524 | ||
|end=59432706 | |end=59432706 | ||
| Line 13: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148541 | |nearest_ensembl=ENSG00000148541 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347840 |
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=59432705 | |start_of_center_position=59432705 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=16(CTCTTTATAAGT,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59432705 |
|---|---|
| End of the center position in the TSS region: | 59432706 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -69524 |
|---|---|
| Nearest PromoterID: | NM_001347840 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | FAM13C |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 16(CTCTTTATAAGT,-,0.00) |
