Difference between revisions of "TSS:Hg 105035.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=768 |entrez_id=8030 |gc_percent=0.691542 |gene_alias=D10S170|H4|PTC|TPC|TST1 |gene_description=coiled-coil domain containing 6 |...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |H4= | ||
| + | |PTC= | ||
| + | |TPC= | ||
| + | |TST1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=668 | ||
| + | |end=59905889 | ||
| + | |end_of_center_position=59905889 | ||
|entrez_id=8030 | |entrez_id=8030 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=D10S170 | + | |gene_alias=D10S170{{!}}H4{{!}}PTC{{!}}TPC{{!}}TST1 |
|gene_description=coiled-coil domain containing 6 | |gene_description=coiled-coil domain containing 6 | ||
|gene_name=CCDC6 | |gene_name=CCDC6 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_005436 | |nearest_refseq=NM_005436 | ||
|nearest_unigene=Hs.591360 | |nearest_unigene=Hs.591360 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=59905887 | ||
| + | |start_of_center_position=59905888 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105035.1 | |tss_id=hg_105035.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59905888 |
|---|---|
| End of the center position in the TSS region: | 59905889 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 668 |
|---|---|
| Nearest PromoterID: | NM_005436 |
| Entrez ID: | 8030 |
| Nearest Unigene: | Hs.591360 |
| Nearest Refseq: | NM_005436 |
| Nearest Ensembl: | ENSG00000108091 |
| Gene Name: | CCDC6 |
| Gene Alias: | D10S170|H4|PTC|TPC|TST1 |
| Gene Description: | coiled-coil domain containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
