Difference between revisions of "TSS:Hg 105043.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CDC28A= | |CDC28A= | ||
|P34CDC2= | |P34CDC2= | ||
| − | |all_trans=ENST00000448257.6:0 ENST00000614696.4:0 | + | |all_trans=ENST00000448257.6:0 ENST00000614696.4:0 CR933728:0 BC107750:0 ENST00000395284.8:-13 NM_001786:-13 X05360:-13 Y00272:-13 AK291939:15 LP764923:-29 LP764925:31 ENST00000519760.1:-34 ENST00000316629.8:-37 NM_001170407:-37 NM_033379:-37 ENST00000475504.6:-126 AK295741:-126 ENST00000519078.6:-160 NM_001170406:-160 NM_001320918:-160 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=60778502 | |end=60778502 | ||
|end_of_center_position=60778497 | |end_of_center_position=60778497 | ||
|entrez_id=983 | |entrez_id=983 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=CDC2 | + | |gene_alias=CDC2{{!}}CDC28A{{!}}P34CDC2 |
|gene_description=cyclin dependent kinase 1 | |gene_description=cyclin dependent kinase 1 | ||
|gene_id=983 | |gene_id=983 | ||
| − | |gene_name=cyclin | + | |gene_name=cyclin dependent kinase 1 |
|gene_source=HGNC:1722 | |gene_source=HGNC:1722 | ||
|gene_symbol=CDK1 | |gene_symbol=CDK1 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:1722 | |hgnc_mgi_id=HGNC:1722 | ||
|nearest_ensembl=ENSG00000170312 | |nearest_ensembl=ENSG00000170312 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001786 |
|nearest_refseq=NM_001786 | |nearest_refseq=NM_001786 | ||
|nearest_unigene=Hs.732435 | |nearest_unigene=Hs.732435 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=60778490 | |start=60778490 | ||
|start_of_center_position=60778496 | |start_of_center_position=60778496 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000448257.6 ENST00000614696.4 | + | |transcript_name=ENST00000448257.6 ENST00000614696.4 CR933728 BC107750 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105043.1 | |tss_id=hg_105043.1 | ||
Revision as of 18:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60778496 |
|---|---|
| End of the center position in the TSS region: | 60778497 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000448257.6 ENST00000614696.4 CR933728 BC107750 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000448257.6:0 ENST00000614696.4:0 CR933728:0 BC107750:0 ENST00000395284.8:-13 NM_001786:-13 X05360:-13 Y00272:-13 AK291939:15 LP764923:-29 LP764925:31 ENST00000519760.1:-34 ENST00000316629.8:-37 NM_001170407:-37 NM_033379:-37 ENST00000475504.6:-126 AK295741:-126 ENST00000519078.6:-160 NM_001170406:-160 NM_001320918:-160 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001786 |
| Entrez ID: | 983 |
| Nearest Unigene: | Hs.732435 |
| Nearest Refseq: | NM_001786 |
| Nearest Ensembl: | ENSG00000170312 |
| Gene Name: | cyclin dependent kinase 1 |
| Gene Alias: | CDC2|CDC28A|P34CDC2 |
| Gene Description: | cyclin dependent kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
