Difference between revisions of "TSS:Hg 105048.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-145 | ||
| + | |end=61001147 | ||
| + | |end_of_center_position=61001142 | ||
|entrez_id=9886 | |entrez_id=9886 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000072422 | |nearest_ensembl=ENSG00000072422 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350908 |
|nearest_refseq=NM_014836 | |nearest_refseq=NM_014836 | ||
|nearest_unigene=Hs.737374 | |nearest_unigene=Hs.737374 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=61001136 | ||
| + | |start_of_center_position=61001141 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105048.1 | |tss_id=hg_105048.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:05, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61001141 |
|---|---|
| End of the center position in the TSS region: | 61001142 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -145 |
|---|---|
| Nearest PromoterID: | NM_001350908 |
| Entrez ID: | 9886 |
| Nearest Unigene: | Hs.737374 |
| Nearest Refseq: | NM_014836 |
| Nearest Ensembl: | ENSG00000072422 |
| Gene Name: | RHOBTB1 |
| Gene Alias: | - |
| Gene Description: | Rho related BTB domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
