Difference between revisions of "TSS:Hg 105060.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MRF-2= | |MRF-2= | ||
|MRF2= | |MRF2= | ||
| − | |all_trans=AB527389:-282 BC156570:-282 BC152736:-282 BC056680:-292 BC107800:-293 AK296921:-302 | + | |all_trans=AB527389:-282 BC156570:-282 BC152736:-282 BC056680:-292 ENST00000681100.1:-293 ENST00000279873.12:-293 NM_032199:-293 BC107800:-293 AK296921:-302 ENST00000644638.1:-308 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-282 | |distance=-282 | ||
| − | |distance_to_tss= | + | |distance_to_tss=295 |
|end=61901996 | |end=61901996 | ||
|end_of_center_position=61901994 | |end_of_center_position=61901994 | ||
|entrez_id=84159 | |entrez_id=84159 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=DESRT | + | |gene_alias=DESRT{{!}}MRF-2{{!}}MRF2 |
|gene_description=AT-rich interaction domain 5B | |gene_description=AT-rich interaction domain 5B | ||
|gene_id=84159 | |gene_id=84159 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_032199 | |nearest_refseq=NM_032199 | ||
|nearest_unigene=Hs.535297 | |nearest_unigene=Hs.535297 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=61901991 | |start=61901991 | ||
Revision as of 18:05, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61901993 |
|---|---|
| End of the center position in the TSS region: | 61901994 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB527389 BC156570 BC152736 |
|---|---|
| Distance: | -282 |
| Num_trans: | 10 |
| All_trans: | AB527389:-282 BC156570:-282 BC152736:-282 BC056680:-292 ENST00000681100.1:-293 ENST00000279873.12:-293 NM_032199:-293 BC107800:-293 AK296921:-302 ENST00000644638.1:-308 |
TATA-Box annotation
| Distance to TSS: | 295 |
|---|---|
| Nearest PromoterID: | NM_032199 |
| Entrez ID: | 84159 |
| Nearest Unigene: | Hs.535297 |
| Nearest Refseq: | NM_032199 |
| Nearest Ensembl: | ENSG00000150347 |
| Gene Name: | AT-rich interaction domain 5B |
| Gene Alias: | DESRT|MRF-2|MRF2 |
| Gene Description: | AT-rich interaction domain 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
