Difference between revisions of "TSS:Hg 10512.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-3829 |entrez_id=1188 |gc_percent=0.606965 |gene_alias=CLCKB|ClC-K2|ClC-Kb |gene_description=chloride voltage-gated channel Kb |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ClC-K2= | ||
| + | |ClC-Kb= | ||
| + | |all_trans=ENST00000447882.1:-113 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-113 | ||
|distance_to_tss=-3829 | |distance_to_tss=-3829 | ||
| + | |end=16039916 | ||
| + | |end_of_center_position=16039907 | ||
|entrez_id=1188 | |entrez_id=1188 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=CLCKB | + | |gene_alias=CLCKB{{!}}ClC-K2{{!}}ClC-Kb |
|gene_description=chloride voltage-gated channel Kb | |gene_description=chloride voltage-gated channel Kb | ||
|gene_name=CLCNKB | |gene_name=CLCNKB | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_000085 | |nearest_refseq=NM_000085 | ||
|nearest_unigene=Hs.352243 | |nearest_unigene=Hs.352243 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=16039897 | ||
| + | |start_of_center_position=16039906 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000447882.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10512.1 | |tss_id=hg_10512.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:06, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16039906 |
|---|---|
| End of the center position in the TSS region: | 16039907 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000447882.1 |
|---|---|
| Distance: | -113 |
| Num_trans: | 1 |
| All_trans: | ENST00000447882.1:-113 |
TATA-Box annotation
| Distance to TSS: | -3829 |
|---|---|
| Nearest PromoterID: | NM_000085 |
| Entrez ID: | 1188 |
| Nearest Unigene: | Hs.352243 |
| Nearest Refseq: | NM_000085 |
| Nearest Ensembl: | ENSG00000184908 |
| Gene Name: | CLCNKB |
| Gene Alias: | CLCKB|ClC-K2|ClC-Kb |
| Gene Description: | chloride voltage-gated channel Kb |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
