Difference between revisions of "TSS:Hg 10516.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000375662.5:248 NM_182623:248 ENST00000494078.1:267 BC016848:273 BC037394:299 AK094085:378 HQ447135:457 KJ900665:457 AB463624:457 CU691488:457 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=248 |
| − | |distance_to_tss=- | + | |distance_to_tss=-249 |
|end=16073901 | |end=16073901 | ||
|end_of_center_position=16073900 | |end_of_center_position=16073900 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_182623 | |nearest_refseq=NM_182623 | ||
|nearest_unigene=Hs.126825 | |nearest_unigene=Hs.126825 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=16073898 | |start=16073898 | ||
|start_of_center_position=16073899 | |start_of_center_position=16073899 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000375662.5 NM_182623 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10516.1 | |tss_id=hg_10516.1 | ||
Revision as of 18:07, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16073899 |
|---|---|
| End of the center position in the TSS region: | 16073900 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375662.5 NM_182623 |
|---|---|
| Distance: | 248 |
| Num_trans: | 10 |
| All_trans: | ENST00000375662.5:248 NM_182623:248 ENST00000494078.1:267 BC016848:273 BC037394:299 AK094085:378 HQ447135:457 KJ900665:457 AB463624:457 CU691488:457 |
TATA-Box annotation
| Distance to TSS: | -249 |
|---|---|
| Nearest PromoterID: | NM_182623 |
| Entrez ID: | 348487 |
| Nearest Unigene: | Hs.126825 |
| Nearest Refseq: | NM_182623 |
| Nearest Ensembl: | ENSG00000185519 |
| Gene Name: | family with sequence similarity 131 member C |
| Gene Alias: | C1orf117 |
| Gene Description: | family with sequence similarity 131 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
