Difference between revisions of "TSS:Hg 105168.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-690 |entrez_id=1959 |gc_percent=0.467662 |gene_alias=AT591|CMT1D|CMT4E|KROX20 |gene_description=early growth response 2 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMT1D= | ||
| + | |CMT4E= | ||
| + | |KROX20= | ||
| + | |all_trans=LF213187:-299 MA448764:-299 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss=- | + | |distance=-299 |
| + | |distance_to_tss=-704 | ||
| + | |end=62817094 | ||
| + | |end_of_center_position=62817070 | ||
|entrez_id=1959 | |entrez_id=1959 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=AT591 | + | |gene_alias=AT591{{!}}CHN1{{!}}CMT1D{{!}}CMT4E{{!}}KROX20 |
|gene_description=early growth response 2 | |gene_description=early growth response 2 | ||
|gene_name=EGR2 | |gene_name=EGR2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122877 | |nearest_ensembl=ENSG00000122877 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001136177 |
|nearest_refseq=NM_000399 | |nearest_refseq=NM_000399 | ||
|nearest_unigene=Hs.1395 | |nearest_unigene=Hs.1395 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=62817045 | ||
| + | |start_of_center_position=62817069 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF213187 MA448764 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105168.1 | |tss_id=hg_105168.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:07, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 62817069 |
|---|---|
| End of the center position in the TSS region: | 62817070 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF213187 MA448764 |
|---|---|
| Distance: | -299 |
| Num_trans: | 2 |
| All_trans: | LF213187:-299 MA448764:-299 |
TATA-Box annotation
| Distance to TSS: | -704 |
|---|---|
| Nearest PromoterID: | NM_001136177 |
| Entrez ID: | 1959 |
| Nearest Unigene: | Hs.1395 |
| Nearest Refseq: | NM_000399 |
| Nearest Ensembl: | ENSG00000122877 |
| Gene Name: | EGR2 |
| Gene Alias: | AT591|CHN1|CMT1D|CMT4E|KROX20 |
| Gene Description: | early growth response 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
