Difference between revisions of "TSS:Hg 105171.1"
From referenceTSS
| Line 3: | Line 3: | ||
|COPR2= | |COPR2= | ||
|NRBF-2= | |NRBF-2= | ||
| − | |all_trans=BC011707:0 AY267839:-12 AY267840:-12 AK225256:-31 AK225257:-35 AK301656:-46 AF267866:-64 | + | |all_trans=BC011707:0 AY267839:-12 AY267840:-12 AK225256:-31 AK225257:-35 ENST00000277746.11:-43 NM_030759:-43 AK301656:-46 AF267866:-64 AL136656:-78 AK054957:-81 AB590768:87 EU832288:87 EU832373:87 HQ447342:87 ENST00000435510.6:-124 NM_001282405:-124 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=49 |
|end=63133384 | |end=63133384 | ||
|end_of_center_position=63133378 | |end_of_center_position=63133378 | ||
|entrez_id=29982 | |entrez_id=29982 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=COPR | + | |gene_alias=COPR{{!}}COPR1{{!}}COPR2{{!}}NRBF-2 |
|gene_description=nuclear receptor binding factor 2 | |gene_description=nuclear receptor binding factor 2 | ||
|gene_id=29982 | |gene_id=29982 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_030759 | |nearest_refseq=NM_030759 | ||
|nearest_unigene=Hs.449628 | |nearest_unigene=Hs.449628 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=63133370 | |start=63133370 | ||
Revision as of 18:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 63133377 |
|---|---|
| End of the center position in the TSS region: | 63133378 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC011707 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | BC011707:0 AY267839:-12 AY267840:-12 AK225256:-31 AK225257:-35 ENST00000277746.11:-43 NM_030759:-43 AK301656:-46 AF267866:-64 AL136656:-78 AK054957:-81 AB590768:87 EU832288:87 EU832373:87 HQ447342:87 ENST00000435510.6:-124 NM_001282405:-124 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_030759 |
| Entrez ID: | 29982 |
| Nearest Unigene: | Hs.449628 |
| Nearest Refseq: | NM_030759 |
| Nearest Ensembl: | ENSG00000148572 |
| Gene Name: | nuclear receptor binding factor 2 |
| Gene Alias: | COPR|COPR1|COPR2|NRBF-2 |
| Gene Description: | nuclear receptor binding factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
