Difference between revisions of "TSS:Hg 105178.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Yip2b= | |Yip2b= | ||
| − | |all_trans=BC057832:0 BC010040:0 | + | |all_trans=ENST00000373758.5:0 NM_001001330:0 BC057832:0 BC010040:0 BC068557:-3 LF384644:-3 MA620221:-3 BC038724:28 AK289976:39 AY562241:123 KJ534927:123 KJ535017:123 KJ535031:123 CU686667:123 HQ447522:123 KJ895854:123 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-7 |
|end=63521423 | |end=63521423 | ||
|end_of_center_position=63521395 | |end_of_center_position=63521395 | ||
|entrez_id=221035 | |entrez_id=221035 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=C10orf74 | + | |gene_alias=C10orf74{{!}}Yip2b |
|gene_description=receptor accessory protein 3 | |gene_description=receptor accessory protein 3 | ||
|gene_id=221035 | |gene_id=221035 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=63521394 | |start_of_center_position=63521394 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC057832 BC010040 | + | |transcript_name=ENST00000373758.5 NM_001001330 BC057832 BC010040 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105178.1 | |tss_id=hg_105178.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=X5DR89 |
}} | }} | ||
Revision as of 18:08, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 63521394 |
|---|---|
| End of the center position in the TSS region: | 63521395 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000373758.5 NM_001001330 BC057832 BC010040 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000373758.5:0 NM_001001330:0 BC057832:0 BC010040:0 BC068557:-3 LF384644:-3 MA620221:-3 BC038724:28 AK289976:39 AY562241:123 KJ534927:123 KJ535017:123 KJ535031:123 CU686667:123 HQ447522:123 KJ895854:123 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NM_001001330 |
| Entrez ID: | 221035 |
| Nearest Unigene: | Hs.499833 |
| Nearest Refseq: | NM_001001330 |
| Nearest Ensembl: | ENSG00000165476 |
| Gene Name: | receptor accessory protein 3 |
| Gene Alias: | C10orf74|Yip2b |
| Gene Description: | receptor accessory protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
