Difference between revisions of "TSS:Hg 105204.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000608678.5:-16 | + | |all_trans=ENST00000666706.1:0 ENST00000659814.1:-14 ENST00000608678.5:-16 ENST00000668041.1:-16 ENST00000660014.1:-16 ENST00000659962.1:-16 ENST00000659387.1:-17 ENST00000657308.1:-23 ENST00000671055.1:-25 ENST00000601888.4:-30 ENST00000598092.3:-30 ENST00000663281.1:-30 ENST00000658125.1:-32 ENST00000598902.6:-32 ENST00000671334.1:-32 ENST00000601926.6:-32 ENST00000670657.1:-32 ENST00000659135.1:-34 ENST00000600848.2:-34 ENST00000661052.1:-36 ENST00000620859.4:-39 ENST00000657227.1:-39 ENST00000666619.1:-42 ENST00000599409.6:-50 ENST00000671392.1:-77 ENST00000659321.1:-84 ENST00000667597.1:-86 ENST00000653705.1:-86 ENST00000666779.1:-86 ENST00000601979.5:-100 ENST00000669518.1:-106 ENST00000433152.8:-214 ENST00000593568.1:311 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-867 | |distance_to_tss=-867 | ||
|end=65570564 | |end=65570564 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1515 | |gene_description=long intergenic non-protein coding RNA 1515 | ||
| − | |gene_id= | + | |gene_id= |
|gene_name=long intergenic non-protein coding RNA 1515 | |gene_name=long intergenic non-protein coding RNA 1515 | ||
|gene_source=HGNC:51210 | |gene_source=HGNC:51210 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_120647 | |nearest_refseq=NR_120647 | ||
|nearest_unigene=Hs.568857 | |nearest_unigene=Hs.568857 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=65570551 | |start=65570551 | ||
|start_of_center_position=65570557 | |start_of_center_position=65570557 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000666706.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105204.1 | |tss_id=hg_105204.1 | ||
Revision as of 18:08, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65570557 |
|---|---|
| End of the center position in the TSS region: | 65570558 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000666706.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 33 |
| All_trans: | ENST00000666706.1:0 ENST00000659814.1:-14 ENST00000608678.5:-16 ENST00000668041.1:-16 ENST00000660014.1:-16 ENST00000659962.1:-16 ENST00000659387.1:-17 ENST00000657308.1:-23 ENST00000671055.1:-25 ENST00000601888.4:-30 ENST00000598092.3:-30 ENST00000663281.1:-30 ENST00000658125.1:-32 ENST00000598902.6:-32 ENST00000671334.1:-32 ENST00000601926.6:-32 ENST00000670657.1:-32 ENST00000659135.1:-34 ENST00000600848.2:-34 ENST00000661052.1:-36 ENST00000620859.4:-39 ENST00000657227.1:-39 ENST00000666619.1:-42 ENST00000599409.6:-50 ENST00000671392.1:-77 ENST00000659321.1:-84 ENST00000667597.1:-86 ENST00000653705.1:-86 ENST00000666779.1:-86 ENST00000601979.5:-100 ENST00000669518.1:-106 ENST00000433152.8:-214 ENST00000593568.1:311 |
TATA-Box annotation
| Distance to TSS: | -867 |
|---|---|
| Nearest PromoterID: | NR_120647 |
| Entrez ID: | 101928913 |
| Nearest Unigene: | Hs.568857 |
| Nearest Refseq: | NR_120647 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1515 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1515 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
