Difference between revisions of "TSS:Hg 105208.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=261 | |distance=261 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1844 |
|end=66927886 | |end=66927886 | ||
|end_of_center_position=66927881 | |end_of_center_position=66927881 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=66927880 | |start_of_center_position=66927880 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=20(AAGTTTTAAAGG,-,0.00),22(GTTTTAAAGGTC,+,0.00) |
|transcript_name=AK294029 | |transcript_name=AK294029 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 18:08, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 66927880 |
|---|---|
| End of the center position in the TSS region: | 66927881 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK294029 |
|---|---|
| Distance: | 261 |
| Num_trans: | 1 |
| All_trans: | AK294029:261 |
TATA-Box annotation
| Distance to TSS: | 1844 |
|---|---|
| Nearest PromoterID: | NM_178011 |
| Entrez ID: | 347731 |
| Nearest Unigene: | Hs.652155 |
| Nearest Refseq: | NM_178011 |
| Nearest Ensembl: | ENSG00000198739 |
| Gene Name: | leucine rich repeat transmembrane neuronal 3 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat transmembrane neuronal 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 20(AAGTTTTAAAGG,-,0.00),22(GTTTTAAAGGTC,+,0.00) |
