Difference between revisions of "TSS:Hg 105215.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-12533 | ||
| + | |end=68087824 | ||
| + | |end_of_center_position=68087817 | ||
|entrez_id=26091 | |entrez_id=26091 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148634 | |nearest_ensembl=ENSG00000148634 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_015601 |
|nearest_refseq=NM_015601 | |nearest_refseq=NM_015601 | ||
|nearest_unigene=Hs.51891 | |nearest_unigene=Hs.51891 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=68087808 | ||
| + | |start_of_center_position=68087816 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105215.1 | |tss_id=hg_105215.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:09, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 68087816 |
|---|---|
| End of the center position in the TSS region: | 68087817 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -12533 |
|---|---|
| Nearest PromoterID: | NM_015601 |
| Entrez ID: | 26091 |
| Nearest Unigene: | Hs.51891 |
| Nearest Refseq: | NM_015601 |
| Nearest Ensembl: | ENSG00000148634 |
| Gene Name: | HERC4 |
| Gene Alias: | - |
| Gene Description: | HECT and RLD domain containing E3 ubiquitin protein ligase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
