Difference between revisions of "TSS:Hg 10522.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CTRCT6= | |CTRCT6= | ||
|ECK= | |ECK= | ||
| − | |all_trans=M59371:-24 BC037166:-31 ENST00000461614.1:-33 | + | |all_trans=M59371:-24 BC037166:-31 ENST00000461614.1:-33 ENST00000358432.8:-50 NM_001329090:-50 NM_004431:-50 AK296788:-50 LP882418:-68 LY623324:-68 MB416867:-68 DQ895231:80 EU176326:80 EU826606:81 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-24 | |distance=-24 | ||
| − | |distance_to_tss= | + | |distance_to_tss=53 |
|end=16156019 | |end=16156019 | ||
|end_of_center_position=16156016 | |end_of_center_position=16156016 | ||
|entrez_id=1969 | |entrez_id=1969 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=ARCC2 | + | |gene_alias=ARCC2{{!}}CTPA{{!}}CTPP1{{!}}CTRCT6{{!}}ECK |
|gene_description=EPH receptor A2 | |gene_description=EPH receptor A2 | ||
|gene_id=1969 | |gene_id=1969 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:3386 | |hgnc_mgi_id=HGNC:3386 | ||
|nearest_ensembl=ENSG00000142627 | |nearest_ensembl=ENSG00000142627 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004431 |
|nearest_refseq=NM_004431 | |nearest_refseq=NM_004431 | ||
|nearest_unigene=Hs.171596 | |nearest_unigene=Hs.171596 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=16156012 | |start=16156012 | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16156015 |
|---|---|
| End of the center position in the TSS region: | 16156016 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M59371 |
|---|---|
| Distance: | -24 |
| Num_trans: | 13 |
| All_trans: | M59371:-24 BC037166:-31 ENST00000461614.1:-33 ENST00000358432.8:-50 NM_001329090:-50 NM_004431:-50 AK296788:-50 LP882418:-68 LY623324:-68 MB416867:-68 DQ895231:80 EU176326:80 EU826606:81 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_004431 |
| Entrez ID: | 1969 |
| Nearest Unigene: | Hs.171596 |
| Nearest Refseq: | NM_004431 |
| Nearest Ensembl: | ENSG00000142627 |
| Gene Name: | EPH receptor A2 |
| Gene Alias: | ARCC2|CTPA|CTPP1|CTRCT6|ECK |
| Gene Description: | EPH receptor A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
