Difference between revisions of "TSS:Hg 105232.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HNRPH3= | |HNRPH3= | ||
| − | |all_trans=ENST00000469172.5:-136 | + | |all_trans=ENST00000469172.5:-136 AK091411:-136 NM_001322438:376 NM_001322445:376 ENST00000461310.5:404 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 10: | Line 10: | ||
|entrez_id=3189 | |entrez_id=3189 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=2H9 | + | |gene_alias=2H9{{!}}HNRPH3 |
|gene_description=heterogeneous nuclear ribonucleoprotein H3 | |gene_description=heterogeneous nuclear ribonucleoprotein H3 | ||
|gene_id=3189 | |gene_id=3189 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=68331313 | |start_of_center_position=68331313 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000469172.5 | + | |transcript_name=ENST00000469172.5 AK091411 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105232.1 | |tss_id=hg_105232.1 | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 68331313 |
|---|---|
| End of the center position in the TSS region: | 68331314 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000469172.5 AK091411 |
|---|---|
| Distance: | -136 |
| Num_trans: | 5 |
| All_trans: | ENST00000469172.5:-136 AK091411:-136 NM_001322438:376 NM_001322445:376 ENST00000461310.5:404 |
TATA-Box annotation
| Distance to TSS: | -380 |
|---|---|
| Nearest PromoterID: | NM_001322438 |
| Entrez ID: | 3189 |
| Nearest Unigene: | Hs.643472 |
| Nearest Refseq: | NM_012207 |
| Nearest Ensembl: | ENSG00000096746 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Alias: | 2H9|HNRPH3 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
