Difference between revisions of "TSS:Hg 105245.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-112 | |distance_to_tss=-112 | ||
|end=68527652 | |end=68527652 | ||
| Line 12: | Line 12: | ||
|entrez_id=8034 | |entrez_id=8034 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=D10S105E | + | |gene_alias=D10S105E{{!}}GDA{{!}}GDC{{!}}HGT.1{{!}}ML7{{!}}hML7 |
|gene_description=solute carrier family 25 member 16 | |gene_description=solute carrier family 25 member 16 | ||
|gene_name=SLC25A16 | |gene_name=SLC25A16 | ||
| Line 18: | Line 18: | ||
|hML7= | |hML7= | ||
|nearest_ensembl=ENSG00000122912 | |nearest_ensembl=ENSG00000122912 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152707 |
|nearest_refseq=NM_152707 | |nearest_refseq=NM_152707 | ||
|nearest_unigene=Hs.180408 | |nearest_unigene=Hs.180408 | ||
| Line 26: | Line 26: | ||
|start_of_center_position=68527634 | |start_of_center_position=68527634 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=79(CCATTAAAACCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68527634 |
|---|---|
| End of the center position in the TSS region: | 68527635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -112 |
|---|---|
| Nearest PromoterID: | NM_152707 |
| Entrez ID: | 8034 |
| Nearest Unigene: | Hs.180408 |
| Nearest Refseq: | NM_152707 |
| Nearest Ensembl: | ENSG00000122912 |
| Gene Name: | SLC25A16 |
| Gene Alias: | D10S105E|GDA|GDC|HGT.1|ML7|hML7 |
| Gene Description: | solute carrier family 25 member 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 79(CCATTAAAACCC,+,0.00) |
