Difference between revisions of "TSS:Hg 10525.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000478210.1:0 ENST00000441785 | + | |all_trans=ENST00000478210.1:0 ENST00000441785.1:0 ENST00000449495.1:-11 ENST00000471928.1:-450 ENST00000478117.5:-479 AL137736:-479 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6141 |
|end=16206532 | |end=16206532 | ||
|end_of_center_position=16206512 | |end_of_center_position=16206512 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153213 | |nearest_refseq=NM_153213 | ||
|nearest_unigene=Hs.591532 | |nearest_unigene=Hs.591532 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=16206490 | |start=16206490 | ||
|start_of_center_position=16206511 | |start_of_center_position=16206511 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000478210.1 ENST00000441785 | + | |transcript_name=ENST00000478210.1 ENST00000441785.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10525.1 | |tss_id=hg_10525.1 | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16206511 |
|---|---|
| End of the center position in the TSS region: | 16206512 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478210.1 ENST00000441785.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000478210.1:0 ENST00000441785.1:0 ENST00000449495.1:-11 ENST00000471928.1:-450 ENST00000478117.5:-479 AL137736:-479 |
TATA-Box annotation
| Distance to TSS: | 6141 |
|---|---|
| Nearest PromoterID: | NM_153213 |
| Entrez ID: | 128272 |
| Nearest Unigene: | Hs.591532 |
| Nearest Refseq: | NM_153213 |
| Nearest Ensembl: | ENSG00000142632 |
| Gene Name: | Rho guanine nucleotide exchange factor 19 |
| Gene Alias: | WGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
