Difference between revisions of "TSS:Hg 105258.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-75961 |entrez_id=55749 |gc_percent=0.378109 |gene_alias=- |gene_description=cell division cycle and apoptosis regulator 1 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-76056 | ||
| + | |end=68645185 | ||
| + | |end_of_center_position=68645184 | ||
|entrez_id=55749 | |entrez_id=55749 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000060339 | |nearest_ensembl=ENSG00000060339 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018237 |
|nearest_refseq=NM_018237 | |nearest_refseq=NM_018237 | ||
|nearest_unigene=Hs.49853 | |nearest_unigene=Hs.49853 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=68645181 | ||
| + | |start_of_center_position=68645183 | ||
| + | |strand=+ | ||
| + | |tata_box=-57(CCATAAAAACGC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105258.1 | |tss_id=hg_105258.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68645183 |
|---|---|
| End of the center position in the TSS region: | 68645184 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -76056 |
|---|---|
| Nearest PromoterID: | NM_018237 |
| Entrez ID: | 55749 |
| Nearest Unigene: | Hs.49853 |
| Nearest Refseq: | NM_018237 |
| Nearest Ensembl: | ENSG00000060339 |
| Gene Name: | CCAR1 |
| Gene Alias: | - |
| Gene Description: | cell division cycle and apoptosis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -57(CCATAAAAACGC,+,0.00) |
