Difference between revisions of "TSS:Hg 105261.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC108682:-237 ENST00000540210.5 | + | |all_trans=BC108682:-237 ENST00000540210.5:-248 BC130626:-248 BC132725:-248 BC144118:-248 ENST00000494903.2:-251 ENST00000543225.5:-261 ENST00000536012.5:-261 AK307671:-261 BX647943:-261 ENST00000543229.5:-264 ENST00000539539.5:-264 ENST00000265872.11:-264 NR_104262:-264 NM_001282960:-264 NM_001282959:-264 NM_018237:-264 AK292649:-264 AK307704:-264 AK122871:-264 AK299307:-264 AK001701:-267 AY249140:-267 BC058846:-274 ENST00000541012.5:-276 ENST00000543719.5:-277 AK298004:-277 AK307550:-278 ENST00000538031.5:-287 AK023438:-289 AF465616:-289 ENST00000630771.2:-359 ENST00000536391.5:-491 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-237 | |distance=-237 | ||
| − | |distance_to_tss= | + | |distance_to_tss=280 |
|end=68721535 | |end=68721535 | ||
|end_of_center_position=68721519 | |end_of_center_position=68721519 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:24236 | |hgnc_mgi_id=HGNC:24236 | ||
|nearest_ensembl=ENSG00000060339 | |nearest_ensembl=ENSG00000060339 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282960 |
|nearest_refseq=NM_018237 | |nearest_refseq=NM_018237 | ||
|nearest_unigene=Hs.49853 | |nearest_unigene=Hs.49853 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=68721502 | |start=68721502 | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68721518 |
|---|---|
| End of the center position in the TSS region: | 68721519 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC108682 |
|---|---|
| Distance: | -237 |
| Num_trans: | 33 |
| All_trans: | BC108682:-237 ENST00000540210.5:-248 BC130626:-248 BC132725:-248 BC144118:-248 ENST00000494903.2:-251 ENST00000543225.5:-261 ENST00000536012.5:-261 AK307671:-261 BX647943:-261 ENST00000543229.5:-264 ENST00000539539.5:-264 ENST00000265872.11:-264 NR_104262:-264 NM_001282960:-264 NM_001282959:-264 NM_018237:-264 AK292649:-264 AK307704:-264 AK122871:-264 AK299307:-264 AK001701:-267 AY249140:-267 BC058846:-274 ENST00000541012.5:-276 ENST00000543719.5:-277 AK298004:-277 AK307550:-278 ENST00000538031.5:-287 AK023438:-289 AF465616:-289 ENST00000630771.2:-359 ENST00000536391.5:-491 |
TATA-Box annotation
| Distance to TSS: | 280 |
|---|---|
| Nearest PromoterID: | NM_001282960 |
| Entrez ID: | 55749 |
| Nearest Unigene: | Hs.49853 |
| Nearest Refseq: | NM_018237 |
| Nearest Ensembl: | ENSG00000060339 |
| Gene Name: | cell division cycle and apoptosis regulator 1 |
| Gene Alias: | - |
| Gene Description: | cell division cycle and apoptosis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
