Difference between revisions of "TSS:Hg 105270.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |MIRN1254= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| − | |entrez_id= | + | |distance_to_tss=32101 |
| + | |end=68787274 | ||
| + | |end_of_center_position=68787273 | ||
| + | |entrez_id=692211 | ||
|gc_percent=0.303483 | |gc_percent=0.303483 | ||
| − | |gene_alias= | + | |gene_alias=HBII-419 |
| − | + | |gene_description=small nucleolar RNA, C/D box 98 | |
| − | + | |gene_name=SNORD98 | |
| − | + | |gene_type=snoRNA | |
| − | |nearest_ensembl= | + | |hsa-mir-1254= |
| − | |nearest_promoter_id= | + | |hsa-mir-1254-1= |
| − | |nearest_refseq= | + | |nearest_ensembl=ENSG00000283551 |
| + | |nearest_promoter_id=NR_003076 | ||
| + | |nearest_refseq=NR_003076 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=68787271 | ||
| + | |start_of_center_position=68787272 | ||
| + | |strand=+ | ||
| + | |tata_box=54(CTTTTTATAGCT,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105270.1 | |tss_id=hg_105270.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68787272 |
|---|---|
| End of the center position in the TSS region: | 68787273 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 32101 |
|---|---|
| Nearest PromoterID: | NR_003076 |
| Entrez ID: | 692211 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_003076 |
| Nearest Ensembl: | ENSG00000283551 |
| Gene Name: | SNORD98 |
| Gene Alias: | HBII-419 |
| Gene Description: | small nucleolar RNA, C/D box 98 |
| Gene Type: | snoRNA |
| CpG%: | 0.01 |
| GC%: | 0.303483 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 54(CTTTTTATAGCT,+,0.00) |
