Difference between revisions of "TSS:Hg 105273.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000298596. | + | |all_trans=ENST00000298596.11:0 ENST00000399169.8:0 NM_001130161:0 NM_152709:0 NM_001130159:0 NM_001130160:0 BC140011:0 BC168379:76 ENST00000399162.2:77 ENST00000399165.8:77 ENST00000642869.1:77 AY842014:77 AY842015:77 AY842016:77 AY842017:77 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152709 | |nearest_refseq=NM_152709 | ||
|nearest_unigene=Hs.37636 | |nearest_unigene=Hs.37636 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=68827522 | |start=68827522 | ||
|start_of_center_position=68827534 | |start_of_center_position=68827534 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000298596. | + | |transcript_name=ENST00000298596.11 ENST00000399169.8 NM_001130161 NM_152709 NM_001130159 NM_001130160 BC140011 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105273.1 | |tss_id=hg_105273.1 | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 68827534 |
|---|---|
| End of the center position in the TSS region: | 68827535 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000298596.11 ENST00000399169.8 NM_001130161 NM_152709 NM_001130159 NM_001130160 BC140011 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000298596.11:0 ENST00000399169.8:0 NM_001130161:0 NM_152709:0 NM_001130159:0 NM_001130160:0 BC140011:0 BC168379:76 ENST00000399162.2:77 ENST00000399165.8:77 ENST00000642869.1:77 AY842014:77 AY842015:77 AY842016:77 AY842017:77 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001130159 |
| Entrez ID: | 219736 |
| Nearest Unigene: | Hs.37636 |
| Nearest Refseq: | NM_152709 |
| Nearest Ensembl: | ENSG00000165730 |
| Gene Name: | storkhead box 1 |
| Gene Alias: | C10orf24 |
| Gene Description: | storkhead box 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
