Difference between revisions of "TSS:Hg 105278.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RH-II/GU= | |RH-II/GU= | ||
|RH-II/GuA= | |RH-II/GuA= | ||
| − | |all_trans=ENST00000620315.1:9 NM_001256910 | + | |all_trans=ENST00000620315.1:9 NM_001256910:9 CR749598:9 CU675917:-180 AB527408:-180 KJ892707:-180 BC004182:-213 BC017228:-213 BC008071:-221 AK315585:-233 U41387:-234 ENST00000354185.9:-236 NM_004728:-236 BC009432:-236 BX648405:241 BC104671:-278 LP895197:-278 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 12: | Line 12: | ||
|entrez_id=9188 | |entrez_id=9188 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=GUA | + | |gene_alias=GUA{{!}}GURDB{{!}}RH-II/GU{{!}}RH-II/GuA |
|gene_description=DExD-box helicase 21 | |gene_description=DExD-box helicase 21 | ||
|gene_id=9188 | |gene_id=9188 | ||
| − | |gene_name= | + | |gene_name=DExD-box helicase 21 |
|gene_source=HGNC:2744 | |gene_source=HGNC:2744 | ||
|gene_symbol=DDX21 | |gene_symbol=DDX21 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_004728 | |nearest_refseq=NM_004728 | ||
|nearest_unigene=Hs.223141 | |nearest_unigene=Hs.223141 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=68956405 | |start=68956405 | ||
|start_of_center_position=68956418 | |start_of_center_position=68956418 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000620315.1 NM_001256910 | + | |transcript_name=ENST00000620315.1 NM_001256910 CR749598 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105278.1 | |tss_id=hg_105278.1 | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68956418 |
|---|---|
| End of the center position in the TSS region: | 68956419 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000620315.1 NM_001256910 CR749598 |
|---|---|
| Distance: | 9 |
| Num_trans: | 17 |
| All_trans: | ENST00000620315.1:9 NM_001256910:9 CR749598:9 CU675917:-180 AB527408:-180 KJ892707:-180 BC004182:-213 BC017228:-213 BC008071:-221 AK315585:-233 U41387:-234 ENST00000354185.9:-236 NM_004728:-236 BC009432:-236 BX648405:241 BC104671:-278 LP895197:-278 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001256910 |
| Entrez ID: | 9188 |
| Nearest Unigene: | Hs.223141 |
| Nearest Refseq: | NM_004728 |
| Nearest Ensembl: | ENSG00000165732 |
| Gene Name: | DExD-box helicase 21 |
| Gene Alias: | GUA|GURDB|RH-II/GU|RH-II/GuA |
| Gene Description: | DExD-box helicase 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
