Difference between revisions of "TSS:Hg 105283.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-5058 |entrez_id=26128 |gc_percent=0.328358 |gene_alias=KBP|KIAA1279|TTC20 |gene_description=KIF1 binding protein |gene_name=KI...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KIAA1279= | ||
| + | |TTC20= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-5140 | ||
| + | |end=68983678 | ||
| + | |end_of_center_position=68983664 | ||
|entrez_id=26128 | |entrez_id=26128 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| − | |gene_alias=KBP | + | |gene_alias=KBP{{!}}KIAA1279{{!}}TTC20 |
|gene_description=KIF1 binding protein | |gene_description=KIF1 binding protein | ||
|gene_name=KIF1BP | |gene_name=KIF1BP | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_015634 | |nearest_refseq=NM_015634 | ||
|nearest_unigene=Hs.279580 | |nearest_unigene=Hs.279580 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=68983648 | ||
| + | |start_of_center_position=68983663 | ||
| + | |strand=+ | ||
| + | |tata_box=-74(GTGCTTAAATGG,-,0.00),-72(GCTTAAATGGTA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105283.1 | |tss_id=hg_105283.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68983663 |
|---|---|
| End of the center position in the TSS region: | 68983664 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5140 |
|---|---|
| Nearest PromoterID: | NM_015634 |
| Entrez ID: | 26128 |
| Nearest Unigene: | Hs.279580 |
| Nearest Refseq: | NM_015634 |
| Nearest Ensembl: | ENSG00000198954 |
| Gene Name: | KIF1BP |
| Gene Alias: | KBP|KIAA1279|TTC20 |
| Gene Description: | KIF1 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -74(GTGCTTAAATGG,-,0.00),-72(GCTTAAATGGTA,+,0.00) |
