Difference between revisions of "TSS:Hg 105285.1"
From referenceTSS
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|KIAA1279= | |KIAA1279= | ||
|TTC20= | |TTC20= | ||
| − | |all_trans= | + | |all_trans=LF384640:-11 MA620217:-11 BC006427:56 AB033105:56 ENST00000625461.2:61 ENST00000626493.2:61 ENST00000635779.2:61 ENST00000637101.2:61 ENST00000637104.2:61 ENST00000637323.2:61 ENST00000637420.2:61 ENST00000637738.2:61 ENST00000638119.2:61 ENST00000674936.1:61 ENST00000674688.1:61 ENST00000674660.1:61 ENST00000676080.1:61 ENST00000675576.1:61 ENST00000361983.7:61 ENST00000636200.2:61 ENST00000635971.2:61 NM_015634:61 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 LF208771:-215 MA444348:-215 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=-11 | |distance=-11 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-66 |
|end=68988742 | |end=68988742 | ||
| + | |end_of_center_position=68988737 | ||
|entrez_id=26128 | |entrez_id=26128 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=KBP | + | |gene_alias=KBP{{!}}KIAA1279{{!}}TTC20 |
|gene_description=KIF1 binding protein | |gene_description=KIF1 binding protein | ||
|gene_id=26128 | |gene_id=26128 | ||
| − | |gene_name= | + | |gene_name=KIF1BP |
|gene_source=HGNC:23419 | |gene_source=HGNC:23419 | ||
|gene_symbol=KIF1BP | |gene_symbol=KIF1BP | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_015634 | |nearest_refseq=NM_015634 | ||
|nearest_unigene=Hs.279580 | |nearest_unigene=Hs.279580 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=68988731 | |start=68988731 | ||
| + | |start_of_center_position=68988736 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF384640 MA620217 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105285.1 | |tss_id=hg_105285.1 | ||
Latest revision as of 18:10, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 68988736 |
|---|---|
| End of the center position in the TSS region: | 68988737 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF384640 MA620217 |
|---|---|
| Distance: | -11 |
| Num_trans: | 28 |
| All_trans: | LF384640:-11 MA620217:-11 BC006427:56 AB033105:56 ENST00000625461.2:61 ENST00000626493.2:61 ENST00000635779.2:61 ENST00000637101.2:61 ENST00000637104.2:61 ENST00000637323.2:61 ENST00000637420.2:61 ENST00000637738.2:61 ENST00000638119.2:61 ENST00000674936.1:61 ENST00000674688.1:61 ENST00000674660.1:61 ENST00000676080.1:61 ENST00000675576.1:61 ENST00000361983.7:61 ENST00000636200.2:61 ENST00000635971.2:61 NM_015634:61 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 LF208771:-215 MA444348:-215 |
TATA-Box annotation
| Distance to TSS: | -66 |
|---|---|
| Nearest PromoterID: | NM_015634 |
| Entrez ID: | 26128 |
| Nearest Unigene: | Hs.279580 |
| Nearest Refseq: | NM_015634 |
| Nearest Ensembl: | ENSG00000198954 |
| Gene Name: | KIF1BP |
| Gene Alias: | KBP|KIAA1279|TTC20 |
| Gene Description: | KIF1 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
