Difference between revisions of "TSS:Hg 105285.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=16 |entrez_id=26128 |gc_percent=0.557214 |gene_alias=KBP|KIAA1279|TTC20 |gene_description=KIF1 binding protein |gene_name=KIF1BP...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |KIAA1279= | ||
| + | |TTC20= | ||
| + | |all_trans=LF384640:-11 MA620217:-11 BC006427:56 AB033105:56 ENST00000625461.2:61 ENST00000626493.2:61 ENST00000635779.2:61 ENST00000637101.2:61 ENST00000637104.2:61 ENST00000637323.2:61 ENST00000637420.2:61 ENST00000637738.2:61 ENST00000638119.2:61 ENST00000674936.1:61 ENST00000674688.1:61 ENST00000674660.1:61 ENST00000676080.1:61 ENST00000675576.1:61 ENST00000361983.7:61 ENST00000636200.2:61 ENST00000635971.2:61 NM_015634:61 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 LF208771:-215 MA444348:-215 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance_to_tss= | + | |distance=-11 |
| + | |distance_to_tss=-66 | ||
| + | |end=68988742 | ||
| + | |end_of_center_position=68988737 | ||
|entrez_id=26128 | |entrez_id=26128 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=KBP | + | |gene_alias=KBP{{!}}KIAA1279{{!}}TTC20 |
|gene_description=KIF1 binding protein | |gene_description=KIF1 binding protein | ||
| + | |gene_id=26128 | ||
|gene_name=KIF1BP | |gene_name=KIF1BP | ||
| + | |gene_source=HGNC:23419 | ||
| + | |gene_symbol=KIF1BP | ||
| + | |gene_synonyms=DKFZP586B0923 KBP TTC20 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23419 | ||
|nearest_ensembl=ENSG00000198954 | |nearest_ensembl=ENSG00000198954 | ||
|nearest_promoter_id=NM_015634 | |nearest_promoter_id=NM_015634 | ||
|nearest_refseq=NM_015634 | |nearest_refseq=NM_015634 | ||
|nearest_unigene=Hs.279580 | |nearest_unigene=Hs.279580 | ||
| + | |num_trans=28 | ||
| + | |species=human | ||
| + | |start=68988731 | ||
| + | |start_of_center_position=68988736 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF384640 MA620217 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105285.1 | |tss_id=hg_105285.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96EK5 | ||
}} | }} | ||
Latest revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68988736 |
|---|---|
| End of the center position in the TSS region: | 68988737 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF384640 MA620217 |
|---|---|
| Distance: | -11 |
| Num_trans: | 28 |
| All_trans: | LF384640:-11 MA620217:-11 BC006427:56 AB033105:56 ENST00000625461.2:61 ENST00000626493.2:61 ENST00000635779.2:61 ENST00000637101.2:61 ENST00000637104.2:61 ENST00000637323.2:61 ENST00000637420.2:61 ENST00000637738.2:61 ENST00000638119.2:61 ENST00000674936.1:61 ENST00000674688.1:61 ENST00000674660.1:61 ENST00000676080.1:61 ENST00000675576.1:61 ENST00000361983.7:61 ENST00000636200.2:61 ENST00000635971.2:61 NM_015634:61 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 LF208771:-215 MA444348:-215 |
TATA-Box annotation
| Distance to TSS: | -66 |
|---|---|
| Nearest PromoterID: | NM_015634 |
| Entrez ID: | 26128 |
| Nearest Unigene: | Hs.279580 |
| Nearest Refseq: | NM_015634 |
| Nearest Ensembl: | ENSG00000198954 |
| Gene Name: | KIF1BP |
| Gene Alias: | KBP|KIAA1279|TTC20 |
| Gene Description: | KIF1 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
