Difference between revisions of "TSS:Hg 105298.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PRG= | |PRG= | ||
|PRG1= | |PRG1= | ||
| − | |all_trans=DQ894620:313 DQ891442:313 | + | |all_trans=NM_001321053:10 DQ894620:313 DQ891442:313 NM_001321054:435 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=10 |
| − | |distance_to_tss= | + | |distance_to_tss=-17 |
|end=69087593 | |end=69087593 | ||
|end_of_center_position=69087586 | |end_of_center_position=69087586 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=PPG | + | |gene_alias=PPG{{!}}PRG{{!}}PRG1 |
|gene_description=serglycin | |gene_description=serglycin | ||
|gene_id=5552 | |gene_id=5552 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=69087585 | |start_of_center_position=69087585 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001321053 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105298.1 | |tss_id=hg_105298.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P10124 |
}} | }} | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69087585 |
|---|---|
| End of the center position in the TSS region: | 69087586 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001321053 |
|---|---|
| Distance: | 10 |
| Num_trans: | 4 |
| All_trans: | NM_001321053:10 DQ894620:313 DQ891442:313 NM_001321054:435 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_001321053 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG|PRG|PRG1 |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
