Difference between revisions of "TSS:Hg 1053.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000437898.1:0 | + | |all_trans=ENST00000437898.1:0 LF357177:0 MA592754:0 AK096098:-94 NR_135115:-103 NR_135114:-103 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=EMC1 antisense RNA 1 |
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=EMC1 antisense RNA 1 | ||
| + | |gene_source=HGNC:54050 | ||
| + | |gene_symbol=EMC1-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:54050 | ||
|nearest_ensembl=ENSG00000230424 | |nearest_ensembl=ENSG00000230424 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135114 |
|nearest_refseq=NR_135114 | |nearest_refseq=NR_135114 | ||
|nearest_unigene=Hs.660534 | |nearest_unigene=Hs.660534 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=19210488 | |start=19210488 | ||
|start_of_center_position=19210513 | |start_of_center_position=19210513 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000437898.1 | + | |transcript_name=ENST00000437898.1 LF357177 MA592754 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1053.1 | |tss_id=hg_1053.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19210513 |
|---|---|
| End of the center position in the TSS region: | 19210514 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000437898.1 LF357177 MA592754 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000437898.1:0 LF357177:0 MA592754:0 AK096098:-94 NR_135115:-103 NR_135114:-103 |
TATA-Box annotation
| Distance to TSS: | 127 |
|---|---|
| Nearest PromoterID: | NR_135114 |
| Entrez ID: | 101927895 |
| Nearest Unigene: | Hs.660534 |
| Nearest Refseq: | NR_135114 |
| Nearest Ensembl: | ENSG00000230424 |
| Gene Name: | EMC1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | EMC1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
