Difference between revisions of "TSS:Hg 10531.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=10234 |entrez_id=79363 |gc_percent=0.721393 |gene_alias=C1orf89 |gene_description=REM2 and RAB like small GTPase 1 |gene_name=RSG...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=10253 | ||
| + | |end=16226936 | ||
| + | |end_of_center_position=16226931 | ||
|entrez_id=79363 | |entrez_id=79363 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C1orf89 | + | |gene_alias=C1orf89{{!}}RSG1 |
| − | |gene_description= | + | |gene_description=ciliogenesis and planar polarity effector 2 |
| − | |gene_name= | + | |gene_name=CPLANE2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000132881 | |nearest_ensembl=ENSG00000132881 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_030907 | |nearest_refseq=NM_030907 | ||
|nearest_unigene=Hs.546430 | |nearest_unigene=Hs.546430 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=16226924 | ||
| + | |start_of_center_position=16226930 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10531.1 | |tss_id=hg_10531.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16226930 |
|---|---|
| End of the center position in the TSS region: | 16226931 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 10253 |
|---|---|
| Nearest PromoterID: | NM_030907 |
| Entrez ID: | 79363 |
| Nearest Unigene: | Hs.546430 |
| Nearest Refseq: | NM_030907 |
| Nearest Ensembl: | ENSG00000132881 |
| Gene Name: | CPLANE2 |
| Gene Alias: | C1orf89|RSG1 |
| Gene Description: | ciliogenesis and planar polarity effector 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
