Difference between revisions of "TSS:Hg 10532.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000671994.1:-8 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=-8 |
| + | |distance_to_tss=5857 | ||
| + | |end=16231327 | ||
| + | |end_of_center_position=16231327 | ||
|entrez_id=79363 | |entrez_id=79363 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=C1orf89 | + | |gene_alias=C1orf89{{!}}RSG1 |
| − | |gene_description= | + | |gene_description=ciliogenesis and planar polarity effector 2 |
| − | |gene_name= | + | |gene_name=CPLANE2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000132881 | |nearest_ensembl=ENSG00000132881 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_030907 | |nearest_refseq=NM_030907 | ||
|nearest_unigene=Hs.546430 | |nearest_unigene=Hs.546430 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=16231325 | ||
| + | |start_of_center_position=16231326 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000671994.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10532.1 | |tss_id=hg_10532.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:11, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16231326 |
|---|---|
| End of the center position in the TSS region: | 16231327 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000671994.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 1 |
| All_trans: | ENST00000671994.1:-8 |
TATA-Box annotation
| Distance to TSS: | 5857 |
|---|---|
| Nearest PromoterID: | NM_030907 |
| Entrez ID: | 79363 |
| Nearest Unigene: | Hs.546430 |
| Nearest Refseq: | NM_030907 |
| Nearest Ensembl: | ENSG00000132881 |
| Gene Name: | CPLANE2 |
| Gene Alias: | C1orf89|RSG1 |
| Gene Description: | ciliogenesis and planar polarity effector 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
