Difference between revisions of "TSS:Hg 105342.1"
From referenceTSS
| Line 7: | Line 7: | ||
|HMSNR= | |HMSNR= | ||
|HXK1= | |HXK1= | ||
| − | |all_trans=ENST00000476368. | + | |all_trans=ENST00000476368.6:-10 ENST00000479594.5:-32 ENST00000464803.6:-32 ENST00000483077.5:-32 AK128226:-32 ENST00000450646.6:-37 ENST00000480047.5:-37 ENST00000360289.6:-37 ENST00000448642.6:-37 NM_033500:-37 NM_033497:-37 NM_001322365:-37 NM_001322364:-37 NM_033498:-37 U38226:-37 U38227:-37 U38228:-37 ENST00000436817.6:-53 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 16: | Line 16: | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=HK | + | |gene_alias=HK{{!}}HK1-ta{{!}}HK1-tb{{!}}HK1-tc{{!}}HKD{{!}}HKI{{!}}HMSNR{{!}}HXK1{{!}}RP79{{!}}hexokinase |
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
|gene_id=3098 | |gene_id=3098 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:4922 | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_033500 |
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=69270036 | |start=69270036 | ||
|start_of_center_position=69270038 | |start_of_center_position=69270038 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000476368. | + | |transcript_name=ENST00000476368.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105342.1 | |tss_id=hg_105342.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8YEE7 |
}} | }} | ||
Revision as of 18:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69270038 |
|---|---|
| End of the center position in the TSS region: | 69270039 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000476368.6 |
|---|---|
| Distance: | -10 |
| Num_trans: | 18 |
| All_trans: | ENST00000476368.6:-10 ENST00000479594.5:-32 ENST00000464803.6:-32 ENST00000483077.5:-32 AK128226:-32 ENST00000450646.6:-37 ENST00000480047.5:-37 ENST00000360289.6:-37 ENST00000448642.6:-37 NM_033500:-37 NM_033497:-37 NM_001322365:-37 NM_001322364:-37 NM_033498:-37 U38226:-37 U38227:-37 U38228:-37 ENST00000436817.6:-53 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_033500 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
